Introduction

moveVis provides tools to visualize movement data (e.g. from GPS tracking) and temporal changes of environmental data (e.g. from remote sensing) by creating video animations. It works with move, sp and raster class inputs and turns them into ggplot2 frames that can be further customized. moveVis uses gifski (wrapping the gifski cargo crate) and av (binding to FFmpeg) to render frames into animated GIF or video files.


Figure 1: Example movement tracks nearby Lake of Constance on top of a OSM watercolor and a mapbox satellite base map



Figure 2: Example movement tracks nearby Lake of Constance and a gradient base layer faded over time

Installation

With version 0.10.0, the package has been rewritten from the ground up with the goal to make it easier to customize the appearance of movement animations. Thus, the logic of the package, its functions and their syntax have changed.

moveVis 0.10.3 (stable) can be installed from CRAN:

install.packages("moveVis")

The development version can be installed from GitHub:

devtools::install_github("16EAGLE/moveVis")

Code written for moveVis version <=0.9.9 will not work with newer versions, but it is quite simple and thus highly recommended to switch to the new syntax due to a variety of advantages. moveVis version <=0.9.9 can still be downloaded here and installed manually:

setwd("your/download/directory")
install.packages("moveVis-0.9.9.tar.gz", repos = NULL)

Function overview

moveVis includes the following functions, sorted by the order they would be applied to create an animation from movement and environmental data:

Preparing movement tracks

  • df2move() converts a data.frame into a move or moveStack object. This is useful if you do not usually work with the move classes and your tracks are present as data.frames.
  • align_move() aligns single and multi-individual movement data to a uniform time scale with a uniform temporal resolution needed for creating an animation from it. Use this function to prepare your movement data for animation depending on the temporal resolution that suits your data.
  • subset_move() subsets a move or moveStack by a given time span. This is useful if you want to create a movement animation of only a temporal subset of your data, e.g. a particular day.

Creating frames

  • get_maptypes() returns a character vector of available map types that can be used with frames_spatial(). moveVis supports OpenStreetMap and Mapbox basemap imagery. Alternatively, you can provide custom imagery to frames_spatial().
  • frames_spatial() creates a list of ggplot2 maps displaying movement. Each object represents a single frame. Each frame can be viewed or modified individually. The returned list of frames can be animated using animate_frames().
  • frames_graph() creates a list of ggplot2 graphs displaying movement-environment interaction. Each object represents a single frame. Each frame can be viewed or modified individually. The returned list of frames can be animated using animate_frames().

Adapting frames

Animating frames (as GIF or video)

Viewing movement tracks

  • view_spatial() displays movement tracks on an interactive mapview or leaflet map.

Get started

The following example shows how to make a simple animation using a default base map by first aligning your movement data to a uniform time scale, creating a list of ggplot2 frames and turning these frames into an animated GIF:

library(moveVis)
library(move)

data("move_data", package = "moveVis") # move class object
# if your tracks are present as data.frames, see df2move() for conversion

# align move_data to a uniform time scale
m <- align_move(move_data, res = 240, digit = 0, unit = "secs")

# create spatial frames with a OpenStreetMap watercolour map
frames <- frames_spatial(m, path_colours = c("red", "green", "blue"),
                         map_service = "osm", map_type = "watercolor", alpha = 0.5) %>% 
  add_labels(x = "Longitude", y = "Latitude") %>% # add some customizations, such as axis labels
  add_northarrow() %>% 
  add_scalebar() %>% 
  add_timestamps(m, type = "label") %>% 
  add_progress()

frames[[100]] # preview one of the frames, e.g. the 100th frame

# animate frames
animate_frames(frames, out_file = "/full/path/to/moveVis.gif")

Further resources

Detailed code examples explaining how to use specific functions are provided at the function help pages. User contributions such as code examples or tutorials are very welcome and are linked below as soon as they have been spotted somewhere on the web:

Animating Animal Tracks From Multiple Years Over A Common Year With MoveVis: An Example With Blue Whale Argos Tracks On Movebank by Daniel M. Palacios, Marine Mammal Institute, Oregon State University

Features to be added

Things and features that should be added in future versions of moveVis (feel free to contribute to this list using a pull request):

Near future:

  • follow population mode
  • follow individual mode

Some day:

  • 3D animations, e.g. for including altitude data

Acknowledgements

This initiative is part of the Opt4Environment project and was funded by the German Aerospace Center (DLR) on behalf of the Federal Ministry for Economic Affairs and Energy (BMWi) with the research grant 50 EE 1403.